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Cluster: HRGMv2_3900_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3900_36 HRGMv2_3900_36_2 878 2806 - GH16_3
pfam HRGMv2_3900_36 HRGMv2_3900_36_3 2844 3779 - F5_F8_type_C
pfam HRGMv2_3900_36 HRGMv2_3900_36_4 3807 5510 - SusD_RagB | SusD-like_3
TC HRGMv2_3900_36 HRGMv2_3900_36_5 5545 8598 - 1.B.14.6.1
pfam HRGMv2_3900_36 HRGMv2_3900_36_6 8643 10568 - SusD_RagB | SusD-like_3
TC HRGMv2_3900_36 HRGMv2_3900_36_7 10594 13749 - 1.B.14.6.1
TC HRGMv2_3900_36 HRGMv2_3900_36_8 14326 14922 + 2.A.51.1.5
TC HRGMv2_3900_36 HRGMv2_3900_36_9 14922 15452 + 2.A.51.1.6
Gene ID: HRGMv2_3900_36_2
Type: CAZyme
Location: 878 - 2806 (-)
Gene ID: HRGMv2_3900_36_3
Type: pfam
Location: 2844 - 3779 (-)
Gene ID: HRGMv2_3900_36_4
Type: pfam
Location: 3807 - 5510 (-)
Gene ID: HRGMv2_3900_36_5
Type: TC
Location: 5545 - 8598 (-)
Gene ID: HRGMv2_3900_36_6
Type: pfam
Location: 8643 - 10568 (-)
Gene ID: HRGMv2_3900_36_7
Type: TC
Location: 10594 - 13749 (-)
Gene ID: HRGMv2_3900_36_8
Type: TC
Location: 14326 - 14922 (+)
Gene ID: HRGMv2_3900_36_9
Type: TC
Location: 14922 - 15452 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Muribaculum
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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