Cluster: HRGMv2_3900_CGC16
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3900
- CGC Family ID: CGCFAM_10493
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3900_24 | HRGMv2_3900_24_4 | 5066 | 6892 | + | 2.A.38.4.3 |
| STP | HRGMv2_3900_24 | HRGMv2_3900_24_5 | 6901 | 7593 | + | TrkA_C |
| pfam | HRGMv2_3900_24 | HRGMv2_3900_24_6 | 7618 | 7911 | - | Dabb |
| TC | HRGMv2_3900_24 | HRGMv2_3900_24_7 | 7921 | 9537 | - | 3.A.1.121.4 |
| NULL(UNKNOWN) | HRGMv2_3900_24 | HRGMv2_3900_24_8 | 9802 | 10110 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3900_24 | HRGMv2_3900_24_9 | 10232 | 12238 | + | GH13_14 |
| TC | HRGMv2_3900_24 | HRGMv2_3900_24_10 | 12266 | 13642 | + | 2.A.2.6.2 |
Gene ID: HRGMv2_3900_24_4
Type: TC
Location: 5066 - 6892 (+)
Type: TC
Location: 5066 - 6892 (+)
Gene ID: HRGMv2_3900_24_5
Type: STP
Location: 6901 - 7593 (+)
Type: STP
Location: 6901 - 7593 (+)
Gene ID: HRGMv2_3900_24_6
Type: pfam
Location: 7618 - 7911 (-)
Type: pfam
Location: 7618 - 7911 (-)
Gene ID: HRGMv2_3900_24_7
Type: TC
Location: 7921 - 9537 (-)
Type: TC
Location: 7921 - 9537 (-)
Gene ID: HRGMv2_3900_24_8
Type:
Location: 9802 - 10110 (+)
Type:
Location: 9802 - 10110 (+)
Gene ID: HRGMv2_3900_24_9
Type: CAZyme
Location: 10232 - 12238 (+)
Type: CAZyme
Location: 10232 - 12238 (+)
Gene ID: HRGMv2_3900_24_10
Type: TC
Location: 12266 - 13642 (+)
Type: TC
Location: 12266 - 13642 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Muribaculum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.