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Cluster: HRGMv2_3900_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3900_19 HRGMv2_3900_19_6 5999 6640 + 1.A.62.2.1
pfam HRGMv2_3900_19 HRGMv2_3900_19_7 6677 7069 + GtrA_DPMS_TM
CAZyme HRGMv2_3900_19 HRGMv2_3900_19_8 7347 9056 + GH35
TC HRGMv2_3900_19 HRGMv2_3900_19_9 9083 10510 + 2.A.2.3.2
CAZyme HRGMv2_3900_19 HRGMv2_3900_19_10 10533 11666 + GH10
CAZyme HRGMv2_3900_19 HRGMv2_3900_19_11 11762 12736 + GH43_1
CAZyme HRGMv2_3900_19 HRGMv2_3900_19_12 12824 14839 + GH67
STP HRGMv2_3900_19 HRGMv2_3900_19_13 14797 15309 - SKI
CAZyme HRGMv2_3900_19 HRGMv2_3900_19_14 15330 16067 - GH25
Gene ID: HRGMv2_3900_19_6
Type: TC
Location: 5999 - 6640 (+)
Gene ID: HRGMv2_3900_19_7
Type: pfam
Location: 6677 - 7069 (+)
Gene ID: HRGMv2_3900_19_8
Type: CAZyme
Location: 7347 - 9056 (+)
Gene ID: HRGMv2_3900_19_9
Type: TC
Location: 9083 - 10510 (+)
Gene ID: HRGMv2_3900_19_10
Type: CAZyme
Location: 10533 - 11666 (+)
Gene ID: HRGMv2_3900_19_11
Type: CAZyme
Location: 11762 - 12736 (+)
Gene ID: HRGMv2_3900_19_12
Type: CAZyme
Location: 12824 - 14839 (+)
Gene ID: HRGMv2_3900_19_13
Type: STP
Location: 14797 - 15309 (-)
Gene ID: HRGMv2_3900_19_14
Type: CAZyme
Location: 15330 - 16067 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Muribaculum
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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