dbCAN Logo

Cluster: HRGMv2_3900_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3900_17 HRGMv2_3900_17_1 19 2307 - 2.A.37.5.2
TC HRGMv2_3900_17 HRGMv2_3900_17_2 2383 3108 - 9.B.20.1.4
NULL(UNKNOWN) HRGMv2_3900_17 HRGMv2_3900_17_3 3125 4045 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3900_17 HRGMv2_3900_17_4 4709 6169 + Metallophos | 5_nucleotid_C | PGA_cap
CAZyme HRGMv2_3900_17 HRGMv2_3900_17_5 6220 9177 + GH3
pfam HRGMv2_3900_17 HRGMv2_3900_17_6 9294 10628 + ELFV_dehydrog | ELFV_dehydrog_N
TF HRGMv2_3900_17 HRGMv2_3900_17_7 10800 13076 + HTH_AraC
CAZyme HRGMv2_3900_17 HRGMv2_3900_17_8 13173 15632 + GH31_4
Gene ID: HRGMv2_3900_17_1
Type: TC
Location: 19 - 2307 (-)
Gene ID: HRGMv2_3900_17_2
Type: TC
Location: 2383 - 3108 (-)
Gene ID: HRGMv2_3900_17_3
Type:
Location: 3125 - 4045 (-)
Gene ID: HRGMv2_3900_17_4
Type: pfam
Location: 4709 - 6169 (+)
Gene ID: HRGMv2_3900_17_5
Type: CAZyme
Location: 6220 - 9177 (+)
Gene ID: HRGMv2_3900_17_6
Type: pfam
Location: 9294 - 10628 (+)
Gene ID: HRGMv2_3900_17_7
Type: TF
Location: 10800 - 13076 (+)
Gene ID: HRGMv2_3900_17_8
Type: CAZyme
Location: 13173 - 15632 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Muribaculum
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List