dbCAN Logo

Cluster: HRGMv2_3898_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3898_18 HRGMv2_3898_18_20 25866 27017 + GT4
pfam HRGMv2_3898_18 HRGMv2_3898_18_21 27020 28300 + UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
CAZyme HRGMv2_3898_18 HRGMv2_3898_18_22 28297 29430 + GT4
CAZyme HRGMv2_3898_18 HRGMv2_3898_18_23 29443 30141 + CE4
CAZyme HRGMv2_3898_18 HRGMv2_3898_18_24 30138 31100 + GT2
TC HRGMv2_3898_18 HRGMv2_3898_18_25 31097 32476 + 9.B.67.3.6
CAZyme HRGMv2_3898_18 HRGMv2_3898_18_26 32492 33703 + GT4
CAZyme HRGMv2_3898_18 HRGMv2_3898_18_27 33735 34529 + GT2
Gene ID: HRGMv2_3898_18_20
Type: CAZyme
Location: 25866 - 27017 (+)
Gene ID: HRGMv2_3898_18_21
Type: pfam
Location: 27020 - 28300 (+)
Gene ID: HRGMv2_3898_18_22
Type: CAZyme
Location: 28297 - 29430 (+)
Gene ID: HRGMv2_3898_18_23
Type: CAZyme
Location: 29443 - 30141 (+)
Gene ID: HRGMv2_3898_18_24
Type: CAZyme
Location: 30138 - 31100 (+)
Gene ID: HRGMv2_3898_18_25
Type: TC
Location: 31097 - 32476 (+)
Gene ID: HRGMv2_3898_18_26
Type: CAZyme
Location: 32492 - 33703 (+)
Gene ID: HRGMv2_3898_18_27
Type: CAZyme
Location: 33735 - 34529 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List