Cluster: HRGMv2_3898_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3898
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3898_15 | HRGMv2_3898_15_2 | 465 | 2105 | + | GT3 |
| CAZyme | HRGMv2_3898_15 | HRGMv2_3898_15_3 | 2133 | 4697 | + | GT35 |
| TC | HRGMv2_3898_15 | HRGMv2_3898_15_4 | 4871 | 5617 | + | 3.A.1.27.2 |
| TC | HRGMv2_3898_15 | HRGMv2_3898_15_5 | 5617 | 6387 | + | 3.A.1.27.5 |
| pfam | HRGMv2_3898_15 | HRGMv2_3898_15_6 | 6497 | 9118 | - | tRNA-synt_2c | DHHA1 | tRNA_SAD |
| TC | HRGMv2_3898_15 | HRGMv2_3898_15_7 | 9244 | 10209 | + | 1.A.34.1.3 |
Gene ID: HRGMv2_3898_15_2
Type: CAZyme
Location: 465 - 2105 (+)
Type: CAZyme
Location: 465 - 2105 (+)
Gene ID: HRGMv2_3898_15_3
Type: CAZyme
Location: 2133 - 4697 (+)
Type: CAZyme
Location: 2133 - 4697 (+)
Gene ID: HRGMv2_3898_15_4
Type: TC
Location: 4871 - 5617 (+)
Type: TC
Location: 4871 - 5617 (+)
Gene ID: HRGMv2_3898_15_5
Type: TC
Location: 5617 - 6387 (+)
Type: TC
Location: 5617 - 6387 (+)
Gene ID: HRGMv2_3898_15_6
Type: pfam
Location: 6497 - 9118 (-)
Type: pfam
Location: 6497 - 9118 (-)
Gene ID: HRGMv2_3898_15_7
Type: TC
Location: 9244 - 10209 (+)
Type: TC
Location: 9244 - 10209 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Species
Lepagella sp947427285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.