Cluster: HRGMv2_3893_CGC24
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3893
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3893_28 | HRGMv2_3893_28_14 | 15056 | 15958 | + | 2.A.4.7.2 |
| pfam | HRGMv2_3893_28 | HRGMv2_3893_28_15 | 15955 | 16743 | + | DNA_alkylation |
| pfam | HRGMv2_3893_28 | HRGMv2_3893_28_16 | 16823 | 18649 | + | Transketolase_N | E1_dh | TPP_enzyme_C | Transket_pyr | Transketolase_C | DXP_synthase_N | DXP_synthase_N |
| TC | HRGMv2_3893_28 | HRGMv2_3893_28_17 | 18890 | 19927 | + | 2.A.98.1.3 |
| CAZyme | HRGMv2_3893_28 | HRGMv2_3893_28_18 | 19987 | 22194 | + | CBM32 | GH29 |
Gene ID: HRGMv2_3893_28_14
Type: TC
Location: 15056 - 15958 (+)
Type: TC
Location: 15056 - 15958 (+)
Gene ID: HRGMv2_3893_28_15
Type: pfam
Location: 15955 - 16743 (+)
Type: pfam
Location: 15955 - 16743 (+)
Gene ID: HRGMv2_3893_28_16
Type: pfam
Location: 16823 - 18649 (+)
Type: pfam
Location: 16823 - 18649 (+)
Gene ID: HRGMv2_3893_28_17
Type: TC
Location: 18890 - 19927 (+)
Type: TC
Location: 18890 - 19927 (+)
Gene ID: HRGMv2_3893_28_18
Type: CAZyme
Location: 19987 - 22194 (+)
Type: CAZyme
Location: 19987 - 22194 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Paramuribaculum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.