Cluster: HRGMv2_3893_CGC22
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3893
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3893_19 | HRGMv2_3893_19_7 | 6278 | 7843 | - | 3.D.10.1.4 |
| NULL(UNKNOWN) | HRGMv2_3893_19 | HRGMv2_3893_19_8 | 8164 | 8751 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3893_19 | HRGMv2_3893_19_9 | 9016 | 11277 | + | KH_1 | S1 | RNase_PH | RNase_PH | RNase_PH_C | RNase_PH_C | PNPase |
| TC | HRGMv2_3893_19 | HRGMv2_3893_19_10 | 11590 | 14622 | + | 1.B.14.6.1 |
| pfam | HRGMv2_3893_19 | HRGMv2_3893_19_11 | 14644 | 16491 | + | SusD_RagB |
| pfam | HRGMv2_3893_19 | HRGMv2_3893_19_12 | 16528 | 16995 | + | DUF5018-rel |
| CAZyme | HRGMv2_3893_19 | HRGMv2_3893_19_13 | 17120 | 19285 | - | GH89 |
Gene ID: HRGMv2_3893_19_7
Type: TC
Location: 6278 - 7843 (-)
Type: TC
Location: 6278 - 7843 (-)
Gene ID: HRGMv2_3893_19_8
Type:
Location: 8164 - 8751 (+)
Type:
Location: 8164 - 8751 (+)
Gene ID: HRGMv2_3893_19_9
Type: pfam
Location: 9016 - 11277 (+)
Type: pfam
Location: 9016 - 11277 (+)
Gene ID: HRGMv2_3893_19_10
Type: TC
Location: 11590 - 14622 (+)
Type: TC
Location: 11590 - 14622 (+)
Gene ID: HRGMv2_3893_19_11
Type: pfam
Location: 14644 - 16491 (+)
Type: pfam
Location: 14644 - 16491 (+)
Gene ID: HRGMv2_3893_19_12
Type: pfam
Location: 16528 - 16995 (+)
Type: pfam
Location: 16528 - 16995 (+)
Gene ID: HRGMv2_3893_19_13
Type: CAZyme
Location: 17120 - 19285 (-)
Type: CAZyme
Location: 17120 - 19285 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Paramuribaculum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.