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Cluster: HRGMv2_3893_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3893_5 HRGMv2_3893_5_46 58215 60542 + GH92
TC HRGMv2_3893_5 HRGMv2_3893_5_47 60758 61126 + 3.D.1.8.1
TC HRGMv2_3893_5 HRGMv2_3893_5_48 61117 61725 + 3.D.1.3.1
TC HRGMv2_3893_5 HRGMv2_3893_5_49 61810 63438 + 3.D.1.5.1
TC HRGMv2_3893_5 HRGMv2_3893_5_50 63498 64574 + 3.D.1.5.1
TC HRGMv2_3893_5 HRGMv2_3893_5_51 64623 66128 + 3.A.2.1.7
pfam HRGMv2_3893_5 HRGMv2_3893_5_52 66167 66403 + ATP-synt_DE_N
TC HRGMv2_3893_5 HRGMv2_3893_5_53 66442 67641 + 3.A.2.1.7
TC HRGMv2_3893_5 HRGMv2_3893_5_54 67697 67933 + 3.A.2.1.6
pfam HRGMv2_3893_5 HRGMv2_3893_5_55 67963 68460 + ATP-synt_B
pfam HRGMv2_3893_5 HRGMv2_3893_5_56 68507 69064 + OSCP
TC HRGMv2_3893_5 HRGMv2_3893_5_57 69116 70696 + 3.A.2.1.4
TC HRGMv2_3893_5 HRGMv2_3893_5_58 70736 71626 + 3.A.2.1.7
STP HRGMv2_3893_5 HRGMv2_3893_5_59 71708 72349 + Fer4 | Fer4
TC HRGMv2_3893_5 HRGMv2_3893_5_60 72370 72885 + 3.D.9.1.1
TC HRGMv2_3893_5 HRGMv2_3893_5_61 72906 73217 + 3.D.1.2.1
TC HRGMv2_3893_5 HRGMv2_3893_5_62 73227 75152 + 3.D.1.3.1
TC HRGMv2_3893_5 HRGMv2_3893_5_63 75196 76689 + 3.D.1.5.1
TC HRGMv2_3893_5 HRGMv2_3893_5_64 76721 78166 + 3.D.9.1.1
Gene ID: HRGMv2_3893_5_46
Type: CAZyme
Location: 58215 - 60542 (+)
Gene ID: HRGMv2_3893_5_47
Type: TC
Location: 60758 - 61126 (+)
Gene ID: HRGMv2_3893_5_48
Type: TC
Location: 61117 - 61725 (+)
Gene ID: HRGMv2_3893_5_49
Type: TC
Location: 61810 - 63438 (+)
Gene ID: HRGMv2_3893_5_50
Type: TC
Location: 63498 - 64574 (+)
Gene ID: HRGMv2_3893_5_51
Type: TC
Location: 64623 - 66128 (+)
Gene ID: HRGMv2_3893_5_52
Type: pfam
Location: 66167 - 66403 (+)
Gene ID: HRGMv2_3893_5_53
Type: TC
Location: 66442 - 67641 (+)
Gene ID: HRGMv2_3893_5_54
Type: TC
Location: 67697 - 67933 (+)
Gene ID: HRGMv2_3893_5_55
Type: pfam
Location: 67963 - 68460 (+)
Gene ID: HRGMv2_3893_5_56
Type: pfam
Location: 68507 - 69064 (+)
Gene ID: HRGMv2_3893_5_57
Type: TC
Location: 69116 - 70696 (+)
Gene ID: HRGMv2_3893_5_58
Type: TC
Location: 70736 - 71626 (+)
Gene ID: HRGMv2_3893_5_59
Type: STP
Location: 71708 - 72349 (+)
Gene ID: HRGMv2_3893_5_60
Type: TC
Location: 72370 - 72885 (+)
Gene ID: HRGMv2_3893_5_61
Type: TC
Location: 72906 - 73217 (+)
Gene ID: HRGMv2_3893_5_62
Type: TC
Location: 73227 - 75152 (+)
Gene ID: HRGMv2_3893_5_63
Type: TC
Location: 75196 - 76689 (+)
Gene ID: HRGMv2_3893_5_64
Type: TC
Location: 76721 - 78166 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Paramuribaculum
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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