dbCAN Logo

Cluster: HRGMv2_3891_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3891_110 HRGMv2_3891_110_2 846 4124 + CBM9 | GH93
STP HRGMv2_3891_110 HRGMv2_3891_110_3 4289 4921 + TetR_N
pfam HRGMv2_3891_110 HRGMv2_3891_110_4 4918 6213 + OEP | OEP
TC HRGMv2_3891_110 HRGMv2_3891_110_5 6210 7097 + 3.A.1.105.15
TC HRGMv2_3891_110 HRGMv2_3891_110_6 7105 8025 + 3.A.1.105.15
TC HRGMv2_3891_110 HRGMv2_3891_110_7 8018 8761 + 3.A.1.105.15
TC HRGMv2_3891_110 HRGMv2_3891_110_8 8789 9550 + 3.A.1.105.4
Gene ID: HRGMv2_3891_110_2
Type: CAZyme
Location: 846 - 4124 (+)
Gene ID: HRGMv2_3891_110_3
Type: STP
Location: 4289 - 4921 (+)
Gene ID: HRGMv2_3891_110_4
Type: pfam
Location: 4918 - 6213 (+)
Gene ID: HRGMv2_3891_110_5
Type: TC
Location: 6210 - 7097 (+)
Gene ID: HRGMv2_3891_110_6
Type: TC
Location: 7105 - 8025 (+)
Gene ID: HRGMv2_3891_110_7
Type: TC
Location: 8018 - 8761 (+)
Gene ID: HRGMv2_3891_110_8
Type: TC
Location: 8789 - 9550 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List