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Cluster: HRGMv2_3891_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3891_50 HRGMv2_3891_50_6 6504 7817 + 1.B.3.1.7
peptidase HRGMv2_3891_50 HRGMv2_3891_50_7 7862 9019 + M75.UPW
pfam HRGMv2_3891_50 HRGMv2_3891_50_8 9046 10629 + DHOR
TC HRGMv2_3891_50 HRGMv2_3891_50_9 10655 12772 + 9.B.14.3.1
TF HRGMv2_3891_50 HRGMv2_3891_50_10 12947 13906 + GerE
pfam HRGMv2_3891_50 HRGMv2_3891_50_11 14117 14308 + Ribosomal_S21
CAZyme HRGMv2_3891_50 HRGMv2_3891_50_12 14497 15366 + GT2
Gene ID: HRGMv2_3891_50_6
Type: TC
Location: 6504 - 7817 (+)
Gene ID: HRGMv2_3891_50_7
Type: peptidase
Location: 7862 - 9019 (+)
Gene ID: HRGMv2_3891_50_8
Type: pfam
Location: 9046 - 10629 (+)
Gene ID: HRGMv2_3891_50_9
Type: TC
Location: 10655 - 12772 (+)
Gene ID: HRGMv2_3891_50_10
Type: TF
Location: 12947 - 13906 (+)
Gene ID: HRGMv2_3891_50_11
Type: pfam
Location: 14117 - 14308 (+)
Gene ID: HRGMv2_3891_50_12
Type: CAZyme
Location: 14497 - 15366 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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