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Cluster: HRGMv2_3891_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3891_2 HRGMv2_3891_2_13 14181 15650 - 2.A.66.1.32
pfam HRGMv2_3891_2 HRGMv2_3891_2_14 15798 16433 + Hydrolase | HAD | HAD_2
TC HRGMv2_3891_2 HRGMv2_3891_2_15 16447 19098 - 3.A.3.2.17
pfam HRGMv2_3891_2 HRGMv2_3891_2_16 19564 19908 + Acetyltransf_1 | Acetyltransf_7
pfam HRGMv2_3891_2 HRGMv2_3891_2_17 20051 22528 - Transglut_core
TC HRGMv2_3891_2 HRGMv2_3891_2_18 22565 23260 - 9.B.158.1.1
CAZyme HRGMv2_3891_2 HRGMv2_3891_2_19 23565 26402 - GH43_31
pfam HRGMv2_3891_2 HRGMv2_3891_2_20 26607 27614 - DUF362
TC HRGMv2_3891_2 HRGMv2_3891_2_21 27650 29590 - 1.B.14.3.1
Gene ID: HRGMv2_3891_2_13
Type: TC
Location: 14181 - 15650 (-)
Gene ID: HRGMv2_3891_2_14
Type: pfam
Location: 15798 - 16433 (+)
Gene ID: HRGMv2_3891_2_15
Type: TC
Location: 16447 - 19098 (-)
Gene ID: HRGMv2_3891_2_16
Type: pfam
Location: 19564 - 19908 (+)
Gene ID: HRGMv2_3891_2_17
Type: pfam
Location: 20051 - 22528 (-)
Gene ID: HRGMv2_3891_2_18
Type: TC
Location: 22565 - 23260 (-)
Gene ID: HRGMv2_3891_2_19
Type: CAZyme
Location: 23565 - 26402 (-)
Gene ID: HRGMv2_3891_2_20
Type: pfam
Location: 26607 - 27614 (-)
Gene ID: HRGMv2_3891_2_21
Type: TC
Location: 27650 - 29590 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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