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Cluster: HRGMv2_3889_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3889_9 HRGMv2_3889_9_26 45852 48203 - GH32
pfam HRGMv2_3889_9 HRGMv2_3889_9_27 48283 49752 - DUF4960
pfam HRGMv2_3889_9 HRGMv2_3889_9_28 49771 51435 - SusD_RagB | SusD-like_3
TC HRGMv2_3889_9 HRGMv2_3889_9_29 51455 54496 - 1.B.14.6.1
TF HRGMv2_3889_9 HRGMv2_3889_9_30 54723 57467 - HTH_AraC
NULL(UNKNOWN) HRGMv2_3889_9 HRGMv2_3889_9_31 57588 57761 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3889_9 HRGMv2_3889_9_32 57844 59652 + GH32
TC HRGMv2_3889_9 HRGMv2_3889_9_33 59691 60878 + 2.A.1.7.17
Gene ID: HRGMv2_3889_9_26
Type: CAZyme
Location: 45852 - 48203 (-)
Gene ID: HRGMv2_3889_9_27
Type: pfam
Location: 48283 - 49752 (-)
Gene ID: HRGMv2_3889_9_28
Type: pfam
Location: 49771 - 51435 (-)
Gene ID: HRGMv2_3889_9_29
Type: TC
Location: 51455 - 54496 (-)
Gene ID: HRGMv2_3889_9_30
Type: TF
Location: 54723 - 57467 (-)
Gene ID: HRGMv2_3889_9_31
Type:
Location: 57588 - 57761 (+)
Gene ID: HRGMv2_3889_9_32
Type: CAZyme
Location: 57844 - 59652 (+)
Gene ID: HRGMv2_3889_9_33
Type: TC
Location: 59691 - 60878 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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