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Cluster: HRGMv2_3889_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3889_7 HRGMv2_3889_7_32 58691 59824 + GT4
pfam HRGMv2_3889_7 HRGMv2_3889_7_33 59849 61129 + UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
CAZyme HRGMv2_3889_7 HRGMv2_3889_7_34 61168 62256 + GT4
CAZyme HRGMv2_3889_7 HRGMv2_3889_7_35 62359 62955 + CE4
CAZyme HRGMv2_3889_7 HRGMv2_3889_7_36 62952 63911 + GT2
TC HRGMv2_3889_7 HRGMv2_3889_7_37 63890 65260 + 9.B.67.3.6
CAZyme HRGMv2_3889_7 HRGMv2_3889_7_38 65257 66450 + GT4
CAZyme HRGMv2_3889_7 HRGMv2_3889_7_39 66443 67225 + GT2
TC HRGMv2_3889_7 HRGMv2_3889_7_40 67277 68419 + 9.B.146.1.4
Gene ID: HRGMv2_3889_7_32
Type: CAZyme
Location: 58691 - 59824 (+)
Gene ID: HRGMv2_3889_7_33
Type: pfam
Location: 59849 - 61129 (+)
Gene ID: HRGMv2_3889_7_34
Type: CAZyme
Location: 61168 - 62256 (+)
Gene ID: HRGMv2_3889_7_35
Type: CAZyme
Location: 62359 - 62955 (+)
Gene ID: HRGMv2_3889_7_36
Type: CAZyme
Location: 62952 - 63911 (+)
Gene ID: HRGMv2_3889_7_37
Type: TC
Location: 63890 - 65260 (+)
Gene ID: HRGMv2_3889_7_38
Type: CAZyme
Location: 65257 - 66450 (+)
Gene ID: HRGMv2_3889_7_39
Type: CAZyme
Location: 66443 - 67225 (+)
Gene ID: HRGMv2_3889_7_40
Type: TC
Location: 67277 - 68419 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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