Cluster: HRGMv2_3889_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_3889
- CGC Family ID: CGCFAM_00145
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3889_29 | HRGMv2_3889_29_19 | 15013 | 18135 | + | 1.B.14.6.1 |
| TC | HRGMv2_3889_29 | HRGMv2_3889_29_20 | 18152 | 19777 | + | 8.A.46.1.5 |
| NULL(UNKNOWN) | HRGMv2_3889_29 | HRGMv2_3889_29_21 | 19950 | 20807 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3889_29 | HRGMv2_3889_29_22 | 21076 | 22272 | + | GH16_3 |
| CAZyme | HRGMv2_3889_29 | HRGMv2_3889_29_23 | 22298 | 24562 | + | GH3 |
| CAZyme | HRGMv2_3889_29 | HRGMv2_3889_29_24 | 24596 | 26050 | + | GH128 |
Gene ID: HRGMv2_3889_29_19
Type: TC
Location: 15013 - 18135 (+)
Type: TC
Location: 15013 - 18135 (+)
Gene ID: HRGMv2_3889_29_20
Type: TC
Location: 18152 - 19777 (+)
Type: TC
Location: 18152 - 19777 (+)
Gene ID: HRGMv2_3889_29_21
Type:
Location: 19950 - 20807 (+)
Type:
Location: 19950 - 20807 (+)
Gene ID: HRGMv2_3889_29_22
Type: CAZyme
Location: 21076 - 22272 (+)
Type: CAZyme
Location: 21076 - 22272 (+)
Gene ID: HRGMv2_3889_29_23
Type: CAZyme
Location: 22298 - 24562 (+)
Type: CAZyme
Location: 22298 - 24562 (+)
Gene ID: HRGMv2_3889_29_24
Type: CAZyme
Location: 24596 - 26050 (+)
Type: CAZyme
Location: 24596 - 26050 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.