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Cluster: HRGMv2_3889_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3889_21 HRGMv2_3889_21_2 1358 2677 - GT30
pfam HRGMv2_3889_21 HRGMv2_3889_21_3 2723 4255 - tRNA-synt_1c | Anticodon_2
pfam HRGMv2_3889_21 HRGMv2_3889_21_4 4301 5017 - DUF3256
TC HRGMv2_3889_21 HRGMv2_3889_21_5 5065 7266 - 3.A.18.1.1
NULL(UNKNOWN) HRGMv2_3889_21 HRGMv2_3889_21_6 7491 8675 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3889_21 HRGMv2_3889_21_7 8748 9740 - 8.A.21.2.2
pfam HRGMv2_3889_21 HRGMv2_3889_21_8 9783 10259 - NfeD
TF HRGMv2_3889_21 HRGMv2_3889_21_9 10315 11253 - HTH_AraC
CAZyme HRGMv2_3889_21 HRGMv2_3889_21_10 11286 12041 - GT2
Gene ID: HRGMv2_3889_21_2
Type: CAZyme
Location: 1358 - 2677 (-)
Gene ID: HRGMv2_3889_21_3
Type: pfam
Location: 2723 - 4255 (-)
Gene ID: HRGMv2_3889_21_4
Type: pfam
Location: 4301 - 5017 (-)
Gene ID: HRGMv2_3889_21_5
Type: TC
Location: 5065 - 7266 (-)
Gene ID: HRGMv2_3889_21_6
Type:
Location: 7491 - 8675 (-)
Gene ID: HRGMv2_3889_21_7
Type: TC
Location: 8748 - 9740 (-)
Gene ID: HRGMv2_3889_21_8
Type: pfam
Location: 9783 - 10259 (-)
Gene ID: HRGMv2_3889_21_9
Type: TF
Location: 10315 - 11253 (-)
Gene ID: HRGMv2_3889_21_10
Type: CAZyme
Location: 11286 - 12041 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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