Cluster: HRGMv2_3889_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3889
- CGC Family ID: CGCFAM_00633
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3889_1 | HRGMv2_3889_1_56 | 71583 | 72587 | + | GT2 |
| peptidase | HRGMv2_3889_1 | HRGMv2_3889_1_57 | 72693 | 74810 | - | M03.UPA |
| pfam | HRGMv2_3889_1 | HRGMv2_3889_1_58 | 74905 | 75993 | - | Exo_endo_phos |
| TC | HRGMv2_3889_1 | HRGMv2_3889_1_59 | 76029 | 76910 | - | 9.B.104.1.2 |
| peptidase | HRGMv2_3889_1 | HRGMv2_3889_1_60 | 76952 | 77779 | - | S54.UPW |
| pfam | HRGMv2_3889_1 | HRGMv2_3889_1_61 | 78021 | 78284 | + | Bac_DNA_binding |
| CAZyme | HRGMv2_3889_1 | HRGMv2_3889_1_62 | 78426 | 81236 | - | GH13 |
Gene ID: HRGMv2_3889_1_56
Type: CAZyme
Location: 71583 - 72587 (+)
Type: CAZyme
Location: 71583 - 72587 (+)
Gene ID: HRGMv2_3889_1_57
Type: peptidase
Location: 72693 - 74810 (-)
Type: peptidase
Location: 72693 - 74810 (-)
Gene ID: HRGMv2_3889_1_58
Type: pfam
Location: 74905 - 75993 (-)
Type: pfam
Location: 74905 - 75993 (-)
Gene ID: HRGMv2_3889_1_59
Type: TC
Location: 76029 - 76910 (-)
Type: TC
Location: 76029 - 76910 (-)
Gene ID: HRGMv2_3889_1_60
Type: peptidase
Location: 76952 - 77779 (-)
Type: peptidase
Location: 76952 - 77779 (-)
Gene ID: HRGMv2_3889_1_61
Type: pfam
Location: 78021 - 78284 (+)
Type: pfam
Location: 78021 - 78284 (+)
Gene ID: HRGMv2_3889_1_62
Type: CAZyme
Location: 78426 - 81236 (-)
Type: CAZyme
Location: 78426 - 81236 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.