Cluster: HRGMv2_3888_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3888
- CGC Family ID: CGCFAM_00007
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3888_3 | HRGMv2_3888_3_6 | 8376 | 9320 | - | GT2 |
| pfam | HRGMv2_3888_3 | HRGMv2_3888_3_7 | 9403 | 10716 | - | UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N |
| pfam | HRGMv2_3888_3 | HRGMv2_3888_3_8 | 10746 | 11810 | - | Acyl_transf_3 |
| TC | HRGMv2_3888_3 | HRGMv2_3888_3_9 | 12086 | 14509 | + | 1.B.14.6.7 |
| STP | HRGMv2_3888_3 | HRGMv2_3888_3_10 | 14617 | 15561 | - | Pribosyltran |
| CAZyme | HRGMv2_3888_3 | HRGMv2_3888_3_11 | 15605 | 17335 | - | GH13_38 |
Gene ID: HRGMv2_3888_3_6
Type: CAZyme
Location: 8376 - 9320 (-)
Type: CAZyme
Location: 8376 - 9320 (-)
Gene ID: HRGMv2_3888_3_7
Type: pfam
Location: 9403 - 10716 (-)
Type: pfam
Location: 9403 - 10716 (-)
Gene ID: HRGMv2_3888_3_8
Type: pfam
Location: 10746 - 11810 (-)
Type: pfam
Location: 10746 - 11810 (-)
Gene ID: HRGMv2_3888_3_9
Type: TC
Location: 12086 - 14509 (+)
Type: TC
Location: 12086 - 14509 (+)
Gene ID: HRGMv2_3888_3_10
Type: STP
Location: 14617 - 15561 (-)
Type: STP
Location: 14617 - 15561 (-)
Gene ID: HRGMv2_3888_3_11
Type: CAZyme
Location: 15605 - 17335 (-)
Type: CAZyme
Location: 15605 - 17335 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
CAG-873
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.