Cluster: HRGMv2_3888_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3888
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3888_2 | HRGMv2_3888_2_142 | 145006 | 146835 | + | 3.A.1.106.1 |
| NULL(UNKNOWN) | HRGMv2_3888_2 | HRGMv2_3888_2_143 | 146994 | 150401 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3888_2 | HRGMv2_3888_2_144 | 150769 | 153576 | - | RCC1 | RCC1 | RCC1 | RCC1 | RCC1 | Big_2 | Fn3_assoc | CHB_HEX_C_1 | RCC1_2 |
| CAZyme | HRGMv2_3888_2 | HRGMv2_3888_2_145 | 154339 | 156651 | - | GH20 |
Gene ID: HRGMv2_3888_2_142
Type: TC
Location: 145006 - 146835 (+)
Type: TC
Location: 145006 - 146835 (+)
Gene ID: HRGMv2_3888_2_143
Type:
Location: 146994 - 150401 (-)
Type:
Location: 146994 - 150401 (-)
Gene ID: HRGMv2_3888_2_144
Type: pfam
Location: 150769 - 153576 (-)
Type: pfam
Location: 150769 - 153576 (-)
Gene ID: HRGMv2_3888_2_145
Type: CAZyme
Location: 154339 - 156651 (-)
Type: CAZyme
Location: 154339 - 156651 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
CAG-873
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.