Cluster: HRGMv2_3888_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3888
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3888_1 | HRGMv2_3888_1_107 | 140497 | 141753 | + | 9.B.146.1.3 |
| pfam | HRGMv2_3888_1 | HRGMv2_3888_1_108 | 141881 | 143242 | + | Mur_ligase_C | Mur_ligase_M | MurD_N | MurD-like_N |
| TC | HRGMv2_3888_1 | HRGMv2_3888_1_109 | 143239 | 144570 | + | 2.A.103.1.3 |
| CAZyme | HRGMv2_3888_1 | HRGMv2_3888_1_110 | 144651 | 145736 | + | GT28 |
Gene ID: HRGMv2_3888_1_107
Type: TC
Location: 140497 - 141753 (+)
Type: TC
Location: 140497 - 141753 (+)
Gene ID: HRGMv2_3888_1_108
Type: pfam
Location: 141881 - 143242 (+)
Type: pfam
Location: 141881 - 143242 (+)
Gene ID: HRGMv2_3888_1_109
Type: TC
Location: 143239 - 144570 (+)
Type: TC
Location: 143239 - 144570 (+)
Gene ID: HRGMv2_3888_1_110
Type: CAZyme
Location: 144651 - 145736 (+)
Type: CAZyme
Location: 144651 - 145736 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
CAG-873
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.