Cluster: HRGMv2_3888_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3888
- CGC Family ID: CGCFAM_02043
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3888_1 | HRGMv2_3888_1_96 | 126658 | 127584 | + | GT2 |
| NULL(UNKNOWN) | HRGMv2_3888_1 | HRGMv2_3888_1_97 | 127540 | 127944 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3888_1 | HRGMv2_3888_1_98 | 128542 | 130329 | + | tRNA-synt_1d | Arg_tRNA_synt_N | DALR_1 |
| TC | HRGMv2_3888_1 | HRGMv2_3888_1_99 | 130535 | 131257 | + | 1.A.14.2.2 |
| TC | HRGMv2_3888_1 | HRGMv2_3888_1_100 | 131648 | 133006 | + | 2.A.66.1.28 |
Gene ID: HRGMv2_3888_1_96
Type: CAZyme
Location: 126658 - 127584 (+)
Type: CAZyme
Location: 126658 - 127584 (+)
Gene ID: HRGMv2_3888_1_97
Type:
Location: 127540 - 127944 (-)
Type:
Location: 127540 - 127944 (-)
Gene ID: HRGMv2_3888_1_98
Type: pfam
Location: 128542 - 130329 (+)
Type: pfam
Location: 128542 - 130329 (+)
Gene ID: HRGMv2_3888_1_99
Type: TC
Location: 130535 - 131257 (+)
Type: TC
Location: 130535 - 131257 (+)
Gene ID: HRGMv2_3888_1_100
Type: TC
Location: 131648 - 133006 (+)
Type: TC
Location: 131648 - 133006 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
CAG-873
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.