Cluster: HRGMv2_3888_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_3888
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3888_1 | HRGMv2_3888_1_64 | 89294 | 90523 | - | GT4 |
| pfam | HRGMv2_3888_1 | HRGMv2_3888_1_65 | 90526 | 91707 | - | Epimerase_2 |
| pfam | HRGMv2_3888_1 | HRGMv2_3888_1_66 | 91788 | 92990 | - | Epimerase | Polysacc_synt_C |
| TC | HRGMv2_3888_1 | HRGMv2_3888_1_67 | 93132 | 94181 | - | 9.B.18.2.1 |
| CAZyme | HRGMv2_3888_1 | HRGMv2_3888_1_68 | 94194 | 95405 | - | GT4 |
| CAZyme | HRGMv2_3888_1 | HRGMv2_3888_1_69 | 95409 | 96566 | - | GT4 |
Gene ID: HRGMv2_3888_1_64
Type: CAZyme
Location: 89294 - 90523 (-)
Type: CAZyme
Location: 89294 - 90523 (-)
Gene ID: HRGMv2_3888_1_65
Type: pfam
Location: 90526 - 91707 (-)
Type: pfam
Location: 90526 - 91707 (-)
Gene ID: HRGMv2_3888_1_66
Type: pfam
Location: 91788 - 92990 (-)
Type: pfam
Location: 91788 - 92990 (-)
Gene ID: HRGMv2_3888_1_67
Type: TC
Location: 93132 - 94181 (-)
Type: TC
Location: 93132 - 94181 (-)
Gene ID: HRGMv2_3888_1_68
Type: CAZyme
Location: 94194 - 95405 (-)
Type: CAZyme
Location: 94194 - 95405 (-)
Gene ID: HRGMv2_3888_1_69
Type: CAZyme
Location: 95409 - 96566 (-)
Type: CAZyme
Location: 95409 - 96566 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
CAG-873
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3888_1_66 | vegan > omnivore | 1.17224 | 0.01560 |