Cluster: HRGMv2_3888_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3888
- CGC Family ID: CGCFAM_06251
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3888_27 | HRGMv2_3888_27_13 | 14520 | 15812 | + | 9.A.40.2.4 |
| CAZyme | HRGMv2_3888_27 | HRGMv2_3888_27_14 | 15937 | 17766 | + | GH9 |
| pfam | HRGMv2_3888_27 | HRGMv2_3888_27_15 | 18197 | 18931 | - | Transcrip_reg | TACO1_YebC_N |
| pfam | HRGMv2_3888_27 | HRGMv2_3888_27_16 | 18989 | 21448 | - | tRNA_bind | FDX-ACB | B3_4 | B5 | tRNA_synthFbeta |
| TC | HRGMv2_3888_27 | HRGMv2_3888_27_17 | 21908 | 23725 | + | 4.C.1.1.14 |
| TC | HRGMv2_3888_27 | HRGMv2_3888_27_18 | 23990 | 24715 | - | 3.A.1.122.2 |
Gene ID: HRGMv2_3888_27_13
Type: TC
Location: 14520 - 15812 (+)
Type: TC
Location: 14520 - 15812 (+)
Gene ID: HRGMv2_3888_27_14
Type: CAZyme
Location: 15937 - 17766 (+)
Type: CAZyme
Location: 15937 - 17766 (+)
Gene ID: HRGMv2_3888_27_15
Type: pfam
Location: 18197 - 18931 (-)
Type: pfam
Location: 18197 - 18931 (-)
Gene ID: HRGMv2_3888_27_16
Type: pfam
Location: 18989 - 21448 (-)
Type: pfam
Location: 18989 - 21448 (-)
Gene ID: HRGMv2_3888_27_17
Type: TC
Location: 21908 - 23725 (+)
Type: TC
Location: 21908 - 23725 (+)
Gene ID: HRGMv2_3888_27_18
Type: TC
Location: 23990 - 24715 (-)
Type: TC
Location: 23990 - 24715 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
CAG-873
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.