dbCAN Logo

Cluster: HRGMv2_3888_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3888_20 HRGMv2_3888_20_24 27536 29293 + GH23
TC HRGMv2_3888_20 HRGMv2_3888_20_25 29456 31516 + 2.A.67.4.2
pfam HRGMv2_3888_20 HRGMv2_3888_20_26 31769 32458 + DUF2807
TC HRGMv2_3888_20 HRGMv2_3888_20_27 32459 33967 + 2.A.66.2.23
NULL(UNKNOWN) HRGMv2_3888_20 HRGMv2_3888_20_28 34011 34376 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3888_20 HRGMv2_3888_20_29 34391 35704 + 2.A.66.1.36
Gene ID: HRGMv2_3888_20_24
Type: CAZyme
Location: 27536 - 29293 (+)
Gene ID: HRGMv2_3888_20_25
Type: TC
Location: 29456 - 31516 (+)
Gene ID: HRGMv2_3888_20_26
Type: pfam
Location: 31769 - 32458 (+)
Gene ID: HRGMv2_3888_20_27
Type: TC
Location: 32459 - 33967 (+)
Gene ID: HRGMv2_3888_20_28
Type:
Location: 34011 - 34376 (+)
Gene ID: HRGMv2_3888_20_29
Type: TC
Location: 34391 - 35704 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
CAG-873
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List