Cluster: HRGMv2_3888_CGC15
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3888
- CGC Family ID: CGCFAM_00072
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3888_18 | HRGMv2_3888_18_6 | 3818 | 5506 | + | GT3 |
| CAZyme | HRGMv2_3888_18 | HRGMv2_3888_18_7 | 5578 | 8211 | + | GT35 |
| NULL(UNKNOWN) | HRGMv2_3888_18 | HRGMv2_3888_18_8 | 8307 | 8471 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3888_18 | HRGMv2_3888_18_9 | 8683 | 9528 | + | 1.B.18.3.3 |
| TC | HRGMv2_3888_18 | HRGMv2_3888_18_10 | 9585 | 12005 | + | 8.A.3.3.4 |
| TC | HRGMv2_3888_18 | HRGMv2_3888_18_11 | 12176 | 12874 | + | 1.A.8.13.2 |
Gene ID: HRGMv2_3888_18_6
Type: CAZyme
Location: 3818 - 5506 (+)
Type: CAZyme
Location: 3818 - 5506 (+)
Gene ID: HRGMv2_3888_18_7
Type: CAZyme
Location: 5578 - 8211 (+)
Type: CAZyme
Location: 5578 - 8211 (+)
Gene ID: HRGMv2_3888_18_8
Type:
Location: 8307 - 8471 (+)
Type:
Location: 8307 - 8471 (+)
Gene ID: HRGMv2_3888_18_9
Type: TC
Location: 8683 - 9528 (+)
Type: TC
Location: 8683 - 9528 (+)
Gene ID: HRGMv2_3888_18_10
Type: TC
Location: 9585 - 12005 (+)
Type: TC
Location: 9585 - 12005 (+)
Gene ID: HRGMv2_3888_18_11
Type: TC
Location: 12176 - 12874 (+)
Type: TC
Location: 12176 - 12874 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
CAG-873
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.