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Cluster: HRGMv2_3885_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3885_1 HRGMv2_3885_1_187 234305 235024 + 2.A.47.4.8
TC HRGMv2_3885_1 HRGMv2_3885_1_188 235028 235387 + 2.A.47.4.8
NULL(UNKNOWN) HRGMv2_3885_1 HRGMv2_3885_1_189 235490 236587 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3885_1 HRGMv2_3885_1_190 236670 237587 - KduI
TC HRGMv2_3885_1 HRGMv2_3885_1_191 237584 239005 - 4.A.5.1.4
sulfatase HRGMv2_3885_1 HRGMv2_3885_1_192 239011 239811 - S1_2
pfam HRGMv2_3885_1 HRGMv2_3885_1_193 239814 240746 - DUF4861
CAZyme HRGMv2_3885_1 HRGMv2_3885_1_194 240780 243125 - GH105 | GH154
Gene ID: HRGMv2_3885_1_187
Type: TC
Location: 234305 - 235024 (+)
Gene ID: HRGMv2_3885_1_188
Type: TC
Location: 235028 - 235387 (+)
Gene ID: HRGMv2_3885_1_189
Type:
Location: 235490 - 236587 (+)
Gene ID: HRGMv2_3885_1_190
Type: pfam
Location: 236670 - 237587 (-)
Gene ID: HRGMv2_3885_1_191
Type: TC
Location: 237584 - 239005 (-)
Gene ID: HRGMv2_3885_1_192
Type: sulfatase
Location: 239011 - 239811 (-)
Gene ID: HRGMv2_3885_1_193
Type: pfam
Location: 239814 - 240746 (-)
Gene ID: HRGMv2_3885_1_194
Type: CAZyme
Location: 240780 - 243125 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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