Cluster: HRGMv2_3885_CGC31
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate: pectin
- Genome ID: HRGMv2_3885
- CGC Family ID: CGCFAM_00830
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3885_34 | HRGMv2_3885_34_1 | 461 | 3592 | + | 1.B.14.6.1 |
| TC | HRGMv2_3885_34 | HRGMv2_3885_34_2 | 3620 | 5212 | + | 8.A.46.1.1 |
| NULL(UNKNOWN) | HRGMv2_3885_34 | HRGMv2_3885_34_3 | 5277 | 6512 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_3885_34 | HRGMv2_3885_34_4 | 6607 | 8070 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3885_34 | HRGMv2_3885_34_5 | 8218 | 9648 | + | GH13 |
| CAZyme | HRGMv2_3885_34 | HRGMv2_3885_34_6 | 9944 | 14521 | - | GH43_19 | GH51_2 |
Gene ID: HRGMv2_3885_34_1
Type: TC
Location: 461 - 3592 (+)
Type: TC
Location: 461 - 3592 (+)
Gene ID: HRGMv2_3885_34_2
Type: TC
Location: 3620 - 5212 (+)
Type: TC
Location: 3620 - 5212 (+)
Gene ID: HRGMv2_3885_34_3
Type:
Location: 5277 - 6512 (+)
Type:
Location: 5277 - 6512 (+)
Gene ID: HRGMv2_3885_34_4
Type:
Location: 6607 - 8070 (+)
Type:
Location: 6607 - 8070 (+)
Gene ID: HRGMv2_3885_34_5
Type: CAZyme
Location: 8218 - 9648 (+)
Type: CAZyme
Location: 8218 - 9648 (+)
Gene ID: HRGMv2_3885_34_6
Type: CAZyme
Location: 9944 - 14521 (-)
Type: CAZyme
Location: 9944 - 14521 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
UBA7173
Species
UBA7173 sp945916235
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.