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Cluster: HRGMv2_3885_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3885_27 HRGMv2_3885_27_20 22212 24245 + GH97
CAZyme HRGMv2_3885_27 HRGMv2_3885_27_21 24296 25867 + GH51_1
pfam HRGMv2_3885_27 HRGMv2_3885_27_22 26913 27884 - DUF362
TC HRGMv2_3885_27 HRGMv2_3885_27_23 27877 28443 - 2.A.37.1.1
TC HRGMv2_3885_27 HRGMv2_3885_27_24 28451 29455 - 8.A.5.1.6
Gene ID: HRGMv2_3885_27_20
Type: CAZyme
Location: 22212 - 24245 (+)
Gene ID: HRGMv2_3885_27_21
Type: CAZyme
Location: 24296 - 25867 (+)
Gene ID: HRGMv2_3885_27_22
Type: pfam
Location: 26913 - 27884 (-)
Gene ID: HRGMv2_3885_27_23
Type: TC
Location: 27877 - 28443 (-)
Gene ID: HRGMv2_3885_27_24
Type: TC
Location: 28451 - 29455 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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