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Cluster: HRGMv2_3885_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3885_9 HRGMv2_3885_9_51 60004 63228 - 2.A.6.2.16
TC HRGMv2_3885_9 HRGMv2_3885_9_52 63260 64438 - 2.A.6.2.25
TC HRGMv2_3885_9 HRGMv2_3885_9_53 64496 65992 - 1.B.17.3.8
TC HRGMv2_3885_9 HRGMv2_3885_9_54 66118 68766 - 3.A.3.2.17
pfam HRGMv2_3885_9 HRGMv2_3885_9_55 69134 69454 + dCMP_cyt_deam_1 | MafB19-deam
TC HRGMv2_3885_9 HRGMv2_3885_9_56 69534 71183 + 9.B.174.1.2
pfam HRGMv2_3885_9 HRGMv2_3885_9_57 71211 71771 + 5-FTHF_cyc-lig
TC HRGMv2_3885_9 HRGMv2_3885_9_58 71823 73814 + 3.A.1.121.4
CAZyme HRGMv2_3885_9 HRGMv2_3885_9_59 73939 74445 + GH29
CAZyme HRGMv2_3885_9 HRGMv2_3885_9_60 74421 75227 + GH29
Gene ID: HRGMv2_3885_9_51
Type: TC
Location: 60004 - 63228 (-)
Gene ID: HRGMv2_3885_9_52
Type: TC
Location: 63260 - 64438 (-)
Gene ID: HRGMv2_3885_9_53
Type: TC
Location: 64496 - 65992 (-)
Gene ID: HRGMv2_3885_9_54
Type: TC
Location: 66118 - 68766 (-)
Gene ID: HRGMv2_3885_9_55
Type: pfam
Location: 69134 - 69454 (+)
Gene ID: HRGMv2_3885_9_56
Type: TC
Location: 69534 - 71183 (+)
Gene ID: HRGMv2_3885_9_57
Type: pfam
Location: 71211 - 71771 (+)
Gene ID: HRGMv2_3885_9_58
Type: TC
Location: 71823 - 73814 (+)
Gene ID: HRGMv2_3885_9_59
Type: CAZyme
Location: 73939 - 74445 (+)
Gene ID: HRGMv2_3885_9_60
Type: CAZyme
Location: 74421 - 75227 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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