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Cluster: HRGMv2_3885_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3885_3 HRGMv2_3885_3_54 65277 67022 - GT83
CAZyme HRGMv2_3885_3 HRGMv2_3885_3_55 67064 70666 - GH43_19 | GH43_34
peptidase HRGMv2_3885_3 HRGMv2_3885_3_56 70894 72111 + M20.003
STP HRGMv2_3885_3 HRGMv2_3885_3_57 72114 73031 + AAA
TC HRGMv2_3885_3 HRGMv2_3885_3_58 73144 74496 + 9.B.145.1.2
pfam HRGMv2_3885_3 HRGMv2_3885_3_59 75094 75690 + NusG
TC HRGMv2_3885_3 HRGMv2_3885_3_60 75762 76904 + 9.B.146.1.4
pfam HRGMv2_3885_3 HRGMv2_3885_3_61 76992 77819 + Poly_export | SLBB_2
TC HRGMv2_3885_3 HRGMv2_3885_3_62 77862 80294 + 8.A.3.3.4
Gene ID: HRGMv2_3885_3_54
Type: CAZyme
Location: 65277 - 67022 (-)
Gene ID: HRGMv2_3885_3_55
Type: CAZyme
Location: 67064 - 70666 (-)
Gene ID: HRGMv2_3885_3_56
Type: peptidase
Location: 70894 - 72111 (+)
Gene ID: HRGMv2_3885_3_57
Type: STP
Location: 72114 - 73031 (+)
Gene ID: HRGMv2_3885_3_58
Type: TC
Location: 73144 - 74496 (+)
Gene ID: HRGMv2_3885_3_59
Type: pfam
Location: 75094 - 75690 (+)
Gene ID: HRGMv2_3885_3_60
Type: TC
Location: 75762 - 76904 (+)
Gene ID: HRGMv2_3885_3_61
Type: pfam
Location: 76992 - 77819 (+)
Gene ID: HRGMv2_3885_3_62
Type: TC
Location: 77862 - 80294 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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