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Cluster: HRGMv2_3878_CGC39

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3878_41 HRGMv2_3878_41_1 731 2941 + GH20
pfam HRGMv2_3878_41 HRGMv2_3878_41_2 3174 3539 + CarboxypepD_reg | CarbopepD_reg_2
TC HRGMv2_3878_41 HRGMv2_3878_41_3 3536 3970 + 1.B.14.6.13
NULL(UNKNOWN) HRGMv2_3878_41 HRGMv2_3878_41_4 3967 4248 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3878_41 HRGMv2_3878_41_5 4365 6329 + 1.B.14.6.2
TC HRGMv2_3878_41 HRGMv2_3878_41_6 6341 8080 + 8.A.46.2.2
CAZyme HRGMv2_3878_41 HRGMv2_3878_41_7 8103 11735 + GH85
TC HRGMv2_3878_41 HRGMv2_3878_41_8 11875 13236 - 9.B.145.1.2
Gene ID: HRGMv2_3878_41_1
Type: CAZyme
Location: 731 - 2941 (+)
Gene ID: HRGMv2_3878_41_2
Type: pfam
Location: 3174 - 3539 (+)
Gene ID: HRGMv2_3878_41_3
Type: TC
Location: 3536 - 3970 (+)
Gene ID: HRGMv2_3878_41_4
Type:
Location: 3967 - 4248 (+)
Gene ID: HRGMv2_3878_41_5
Type: TC
Location: 4365 - 6329 (+)
Gene ID: HRGMv2_3878_41_6
Type: TC
Location: 6341 - 8080 (+)
Gene ID: HRGMv2_3878_41_7
Type: CAZyme
Location: 8103 - 11735 (+)
Gene ID: HRGMv2_3878_41_8
Type: TC
Location: 11875 - 13236 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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