dbCAN Logo

Cluster: HRGMv2_3878_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3878_34 HRGMv2_3878_34_7 8789 10798 + GH127
pfam HRGMv2_3878_34 HRGMv2_3878_34_8 10824 11849 + Exo_endo_phos
NULL(UNKNOWN) HRGMv2_3878_34 HRGMv2_3878_34_9 11862 13445 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3878_34 HRGMv2_3878_34_10 13587 15755 + GH89
pfam HRGMv2_3878_34 HRGMv2_3878_34_11 15792 16937 + Gly_kinase
TC HRGMv2_3878_34 HRGMv2_3878_34_12 16930 18183 + 2.A.8.1.9
pfam HRGMv2_3878_34 HRGMv2_3878_34_13 18150 19268 + HGSNAT_cat
CAZyme HRGMv2_3878_34 HRGMv2_3878_34_14 19279 21453 + GH89
Gene ID: HRGMv2_3878_34_7
Type: CAZyme
Location: 8789 - 10798 (+)
Gene ID: HRGMv2_3878_34_8
Type: pfam
Location: 10824 - 11849 (+)
Gene ID: HRGMv2_3878_34_9
Type:
Location: 11862 - 13445 (+)
Gene ID: HRGMv2_3878_34_10
Type: CAZyme
Location: 13587 - 15755 (+)
Gene ID: HRGMv2_3878_34_11
Type: pfam
Location: 15792 - 16937 (+)
Gene ID: HRGMv2_3878_34_12
Type: TC
Location: 16930 - 18183 (+)
Gene ID: HRGMv2_3878_34_13
Type: pfam
Location: 18150 - 19268 (+)
Gene ID: HRGMv2_3878_34_14
Type: CAZyme
Location: 19279 - 21453 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List