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Cluster: HRGMv2_3878_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3878_29 HRGMv2_3878_29_10 6214 8142 - CE20 | CE20
CAZyme HRGMv2_3878_29 HRGMv2_3878_29_11 8148 10808 - CBM67 | GH78
TC HRGMv2_3878_29 HRGMv2_3878_29_12 10822 12237 - 2.A.2.3.6
CAZyme HRGMv2_3878_29 HRGMv2_3878_29_13 12247 13410 - GH130_1
CAZyme HRGMv2_3878_29 HRGMv2_3878_29_14 13450 14811 - GH140
CAZyme HRGMv2_3878_29 HRGMv2_3878_29_15 14817 15842 - GH5_5
CAZyme HRGMv2_3878_29 HRGMv2_3878_29_16 15858 18434 - GH2
CAZyme HRGMv2_3878_29 HRGMv2_3878_29_17 18445 19536 - GH5_5
pfam HRGMv2_3878_29 HRGMv2_3878_29_18 19621 20811 - TIG | SGBP_B_XBD
TC HRGMv2_3878_29 HRGMv2_3878_29_19 20841 22607 - 8.A.46.1.6
TC HRGMv2_3878_29 HRGMv2_3878_29_20 22620 25856 - 1.B.14.6.1
CAZyme HRGMv2_3878_29 HRGMv2_3878_29_21 25896 26885 - GH5_2
Gene ID: HRGMv2_3878_29_10
Type: CAZyme
Location: 6214 - 8142 (-)
Gene ID: HRGMv2_3878_29_11
Type: CAZyme
Location: 8148 - 10808 (-)
Gene ID: HRGMv2_3878_29_12
Type: TC
Location: 10822 - 12237 (-)
Gene ID: HRGMv2_3878_29_13
Type: CAZyme
Location: 12247 - 13410 (-)
Gene ID: HRGMv2_3878_29_14
Type: CAZyme
Location: 13450 - 14811 (-)
Gene ID: HRGMv2_3878_29_15
Type: CAZyme
Location: 14817 - 15842 (-)
Gene ID: HRGMv2_3878_29_16
Type: CAZyme
Location: 15858 - 18434 (-)
Gene ID: HRGMv2_3878_29_17
Type: CAZyme
Location: 18445 - 19536 (-)
Gene ID: HRGMv2_3878_29_18
Type: pfam
Location: 19621 - 20811 (-)
Gene ID: HRGMv2_3878_29_19
Type: TC
Location: 20841 - 22607 (-)
Gene ID: HRGMv2_3878_29_20
Type: TC
Location: 22620 - 25856 (-)
Gene ID: HRGMv2_3878_29_21
Type: CAZyme
Location: 25896 - 26885 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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