dbCAN Logo

Cluster: HRGMv2_3878_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3878_23 HRGMv2_3878_23_38 32708 35143 + 1.B.14.3.1
pfam HRGMv2_3878_23 HRGMv2_3878_23_39 35195 36670 + DUF4374
pfam HRGMv2_3878_23 HRGMv2_3878_23_40 36758 37918 + PepSY | PepSY_TM
TC HRGMv2_3878_23 HRGMv2_3878_23_41 38020 39846 - 3.A.1.135.5
CAZyme HRGMv2_3878_23 HRGMv2_3878_23_42 40114 40839 + GT2
NULL(UNKNOWN) HRGMv2_3878_23 HRGMv2_3878_23_43 40841 41434 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3878_23 HRGMv2_3878_23_44 41441 42817 + PMT_2
TC HRGMv2_3878_23 HRGMv2_3878_23_45 43143 45938 + 1.C.105.2.12
Gene ID: HRGMv2_3878_23_38
Type: TC
Location: 32708 - 35143 (+)
Gene ID: HRGMv2_3878_23_39
Type: pfam
Location: 35195 - 36670 (+)
Gene ID: HRGMv2_3878_23_40
Type: pfam
Location: 36758 - 37918 (+)
Gene ID: HRGMv2_3878_23_41
Type: TC
Location: 38020 - 39846 (-)
Gene ID: HRGMv2_3878_23_42
Type: CAZyme
Location: 40114 - 40839 (+)
Gene ID: HRGMv2_3878_23_43
Type:
Location: 40841 - 41434 (+)
Gene ID: HRGMv2_3878_23_44
Type: pfam
Location: 41441 - 42817 (+)
Gene ID: HRGMv2_3878_23_45
Type: TC
Location: 43143 - 45938 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List