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Cluster: HRGMv2_3878_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3878_12 HRGMv2_3878_12_37 46641 49634 + 1.B.14.6.1
TC HRGMv2_3878_12 HRGMv2_3878_12_38 49648 51144 + 8.A.46.1.3
pfam HRGMv2_3878_12 HRGMv2_3878_12_39 51191 52600 + SusE | SusF_SusE | SusF_SusE
CAZyme HRGMv2_3878_12 HRGMv2_3878_12_40 52613 54388 + GH66
CAZyme HRGMv2_3878_12 HRGMv2_3878_12_41 54487 57552 + GH31_1
CAZyme HRGMv2_3878_12 HRGMv2_3878_12_42 57576 59735 + GH97
NULL(UNKNOWN) HRGMv2_3878_12 HRGMv2_3878_12_43 60072 60206 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3878_12 HRGMv2_3878_12_44 60313 61482 + 2.A.6.2.4
TC HRGMv2_3878_12 HRGMv2_3878_12_45 61514 64693 + 2.A.6.2.22
TC HRGMv2_3878_12 HRGMv2_3878_12_46 64723 66132 + 2.A.6.2.20
pfam HRGMv2_3878_12 HRGMv2_3878_12_47 66156 66941 + Acetyltransf_11
STP HRGMv2_3878_12 HRGMv2_3878_12_48 67183 67815 + TetR_N
TC HRGMv2_3878_12 HRGMv2_3878_12_49 67872 69350 + 1.B.17.1.1
TC HRGMv2_3878_12 HRGMv2_3878_12_50 69382 70398 + 2.A.6.2.25
TC HRGMv2_3878_12 HRGMv2_3878_12_51 70451 73579 + 2.A.6.3.6
Gene ID: HRGMv2_3878_12_37
Type: TC
Location: 46641 - 49634 (+)
Gene ID: HRGMv2_3878_12_38
Type: TC
Location: 49648 - 51144 (+)
Gene ID: HRGMv2_3878_12_39
Type: pfam
Location: 51191 - 52600 (+)
Gene ID: HRGMv2_3878_12_40
Type: CAZyme
Location: 52613 - 54388 (+)
Gene ID: HRGMv2_3878_12_41
Type: CAZyme
Location: 54487 - 57552 (+)
Gene ID: HRGMv2_3878_12_42
Type: CAZyme
Location: 57576 - 59735 (+)
Gene ID: HRGMv2_3878_12_43
Type:
Location: 60072 - 60206 (+)
Gene ID: HRGMv2_3878_12_44
Type: TC
Location: 60313 - 61482 (+)
Gene ID: HRGMv2_3878_12_45
Type: TC
Location: 61514 - 64693 (+)
Gene ID: HRGMv2_3878_12_46
Type: TC
Location: 64723 - 66132 (+)
Gene ID: HRGMv2_3878_12_47
Type: pfam
Location: 66156 - 66941 (+)
Gene ID: HRGMv2_3878_12_48
Type: STP
Location: 67183 - 67815 (+)
Gene ID: HRGMv2_3878_12_49
Type: TC
Location: 67872 - 69350 (+)
Gene ID: HRGMv2_3878_12_50
Type: TC
Location: 69382 - 70398 (+)
Gene ID: HRGMv2_3878_12_51
Type: TC
Location: 70451 - 73579 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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