Cluster: HRGMv2_3876_CGC8
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_3876
- CGC Family ID: CGCFAM_00998
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3876_7 | HRGMv2_3876_7_31 | 45774 | 46049 | + | 2.A.7.2.1 |
| pfam | HRGMv2_3876_7 | HRGMv2_3876_7_32 | 46057 | 47172 | - | Flavodoxin_4 | Cyclophil_like2 |
| CAZyme | HRGMv2_3876_7 | HRGMv2_3876_7_33 | 47649 | 50504 | + | GH31_4 |
| CAZyme | HRGMv2_3876_7 | HRGMv2_3876_7_34 | 50535 | 52604 | - | GH97 |
| STP | HRGMv2_3876_7 | HRGMv2_3876_7_35 | 52672 | 53691 | - | FecR |
| STP | HRGMv2_3876_7 | HRGMv2_3876_7_36 | 53701 | 54288 | - | Sigma70_r2 | Sigma70_r4_2 |
| TC | HRGMv2_3876_7 | HRGMv2_3876_7_37 | 54485 | 57781 | + | 1.B.14.6.1 |
| TC | HRGMv2_3876_7 | HRGMv2_3876_7_38 | 57799 | 59538 | + | 8.A.46.1.1 |
| pfam | HRGMv2_3876_7 | HRGMv2_3876_7_39 | 59603 | 61150 | + | SusF_SusE |
| CAZyme | HRGMv2_3876_7 | HRGMv2_3876_7_40 | 61173 | 62603 | + | GH27 |
| pfam | HRGMv2_3876_7 | HRGMv2_3876_7_41 | 62637 | 63905 | + | SusF_SusE |
| CAZyme | HRGMv2_3876_7 | HRGMv2_3876_7_42 | 63988 | 67107 | + | GH3 | GH43_34 |
| CAZyme | HRGMv2_3876_7 | HRGMv2_3876_7_43 | 67126 | 69387 | + | GH3 |
Gene ID: HRGMv2_3876_7_31
Type: TC
Location: 45774 - 46049 (+)
Type: TC
Location: 45774 - 46049 (+)
Gene ID: HRGMv2_3876_7_32
Type: pfam
Location: 46057 - 47172 (-)
Type: pfam
Location: 46057 - 47172 (-)
Gene ID: HRGMv2_3876_7_33
Type: CAZyme
Location: 47649 - 50504 (+)
Type: CAZyme
Location: 47649 - 50504 (+)
Gene ID: HRGMv2_3876_7_34
Type: CAZyme
Location: 50535 - 52604 (-)
Type: CAZyme
Location: 50535 - 52604 (-)
Gene ID: HRGMv2_3876_7_35
Type: STP
Location: 52672 - 53691 (-)
Type: STP
Location: 52672 - 53691 (-)
Gene ID: HRGMv2_3876_7_36
Type: STP
Location: 53701 - 54288 (-)
Type: STP
Location: 53701 - 54288 (-)
Gene ID: HRGMv2_3876_7_37
Type: TC
Location: 54485 - 57781 (+)
Type: TC
Location: 54485 - 57781 (+)
Gene ID: HRGMv2_3876_7_38
Type: TC
Location: 57799 - 59538 (+)
Type: TC
Location: 57799 - 59538 (+)
Gene ID: HRGMv2_3876_7_39
Type: pfam
Location: 59603 - 61150 (+)
Type: pfam
Location: 59603 - 61150 (+)
Gene ID: HRGMv2_3876_7_40
Type: CAZyme
Location: 61173 - 62603 (+)
Type: CAZyme
Location: 61173 - 62603 (+)
Gene ID: HRGMv2_3876_7_41
Type: pfam
Location: 62637 - 63905 (+)
Type: pfam
Location: 62637 - 63905 (+)
Gene ID: HRGMv2_3876_7_42
Type: CAZyme
Location: 63988 - 67107 (+)
Type: CAZyme
Location: 63988 - 67107 (+)
Gene ID: HRGMv2_3876_7_43
Type: CAZyme
Location: 67126 - 69387 (+)
Type: CAZyme
Location: 67126 - 69387 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
UBA7173
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.