Cluster: HRGMv2_3876_CGC35
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate: pectin
- Genome ID: HRGMv2_3876
- CGC Family ID: CGCFAM_00136
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3876_76 | HRGMv2_3876_76_4 | 2271 | 2909 | + | 1.A.62.2.1 |
| pfam | HRGMv2_3876_76 | HRGMv2_3876_76_5 | 2942 | 3382 | + | GtrA_DPMS_TM |
| TC | HRGMv2_3876_76 | HRGMv2_3876_76_6 | 3827 | 7081 | + | 1.B.14.6.1 |
| pfam | HRGMv2_3876_76 | HRGMv2_3876_76_7 | 7121 | 9265 | + | SusD_RagB | SusD-like_3 |
| NULL(UNKNOWN) | HRGMv2_3876_76 | HRGMv2_3876_76_8 | 9365 | 10282 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3876_76 | HRGMv2_3876_76_9 | 10432 | 13959 | + | PL1_2 |
Gene ID: HRGMv2_3876_76_4
Type: TC
Location: 2271 - 2909 (+)
Type: TC
Location: 2271 - 2909 (+)
Gene ID: HRGMv2_3876_76_5
Type: pfam
Location: 2942 - 3382 (+)
Type: pfam
Location: 2942 - 3382 (+)
Gene ID: HRGMv2_3876_76_6
Type: TC
Location: 3827 - 7081 (+)
Type: TC
Location: 3827 - 7081 (+)
Gene ID: HRGMv2_3876_76_7
Type: pfam
Location: 7121 - 9265 (+)
Type: pfam
Location: 7121 - 9265 (+)
Gene ID: HRGMv2_3876_76_8
Type:
Location: 9365 - 10282 (+)
Type:
Location: 9365 - 10282 (+)
Gene ID: HRGMv2_3876_76_9
Type: CAZyme
Location: 10432 - 13959 (+)
Type: CAZyme
Location: 10432 - 13959 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
UBA7173
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.