Cluster: HRGMv2_3876_CGC25
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_3876
- CGC Family ID: CGCFAM_10485
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3876_41 | HRGMv2_3876_41_1 | 3 | 2045 | - | 1.B.14.6.1 |
| TF | HRGMv2_3876_41 | HRGMv2_3876_41_2 | 2338 | 6444 | + | HTH_AraC |
| CAZyme | HRGMv2_3876_41 | HRGMv2_3876_41_3 | 6595 | 7497 | + | GH16_3 |
| NULL(UNKNOWN) | HRGMv2_3876_41 | HRGMv2_3876_41_4 | 7683 | 8156 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_3876_41 | HRGMv2_3876_41_5 | 8164 | 8616 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3876_41 | HRGMv2_3876_41_6 | 8620 | 9840 | + | GH16_3 |
| NULL(UNKNOWN) | HRGMv2_3876_41 | HRGMv2_3876_41_7 | 9885 | 11363 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3876_41 | HRGMv2_3876_41_8 | 11394 | 13124 | + | LRR_5 | LRR_5 |
| CAZyme | HRGMv2_3876_41 | HRGMv2_3876_41_9 | 13357 | 16836 | + | CE7 | GH3 |
| pfam | HRGMv2_3876_41 | HRGMv2_3876_41_10 | 16894 | 18378 | + | Lactamase_B |
| TC | HRGMv2_3876_41 | HRGMv2_3876_41_11 | 18928 | 21234 | + | 1.B.14.1.4 |
| NULL(UNKNOWN) | HRGMv2_3876_41 | HRGMv2_3876_41_12 | 21245 | 21820 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3876_41 | HRGMv2_3876_41_13 | 22171 | 24537 | + | GT51 |
Gene ID: HRGMv2_3876_41_1
Type: TC
Location: 3 - 2045 (-)
Type: TC
Location: 3 - 2045 (-)
Gene ID: HRGMv2_3876_41_2
Type: TF
Location: 2338 - 6444 (+)
Type: TF
Location: 2338 - 6444 (+)
Gene ID: HRGMv2_3876_41_3
Type: CAZyme
Location: 6595 - 7497 (+)
Type: CAZyme
Location: 6595 - 7497 (+)
Gene ID: HRGMv2_3876_41_4
Type:
Location: 7683 - 8156 (+)
Type:
Location: 7683 - 8156 (+)
Gene ID: HRGMv2_3876_41_5
Type:
Location: 8164 - 8616 (+)
Type:
Location: 8164 - 8616 (+)
Gene ID: HRGMv2_3876_41_6
Type: CAZyme
Location: 8620 - 9840 (+)
Type: CAZyme
Location: 8620 - 9840 (+)
Gene ID: HRGMv2_3876_41_7
Type:
Location: 9885 - 11363 (+)
Type:
Location: 9885 - 11363 (+)
Gene ID: HRGMv2_3876_41_8
Type: pfam
Location: 11394 - 13124 (+)
Type: pfam
Location: 11394 - 13124 (+)
Gene ID: HRGMv2_3876_41_9
Type: CAZyme
Location: 13357 - 16836 (+)
Type: CAZyme
Location: 13357 - 16836 (+)
Gene ID: HRGMv2_3876_41_10
Type: pfam
Location: 16894 - 18378 (+)
Type: pfam
Location: 16894 - 18378 (+)
Gene ID: HRGMv2_3876_41_11
Type: TC
Location: 18928 - 21234 (+)
Type: TC
Location: 18928 - 21234 (+)
Gene ID: HRGMv2_3876_41_12
Type:
Location: 21245 - 21820 (-)
Type:
Location: 21245 - 21820 (-)
Gene ID: HRGMv2_3876_41_13
Type: CAZyme
Location: 22171 - 24537 (+)
Type: CAZyme
Location: 22171 - 24537 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
UBA7173
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.