Cluster: HRGMv2_3876_CGC16
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_3876
- CGC Family ID: CGCFAM_01483
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3876_21 | HRGMv2_3876_21_21 | 24360 | 25391 | + | GH43_3 |
| CAZyme | HRGMv2_3876_21 | HRGMv2_3876_21_22 | 25520 | 27280 | + | GH43_3 |
| STP | HRGMv2_3876_21 | HRGMv2_3876_21_23 | 27297 | 27674 | + | Sigma70_r2 |
| STP | HRGMv2_3876_21 | HRGMv2_3876_21_24 | 27875 | 28888 | + | FecR |
| TC | HRGMv2_3876_21 | HRGMv2_3876_21_25 | 28950 | 32468 | + | 1.B.14.6.1 |
| pfam | HRGMv2_3876_21 | HRGMv2_3876_21_26 | 32496 | 34295 | + | SusD_RagB | SusD-like_3 |
| NULL(UNKNOWN) | HRGMv2_3876_21 | HRGMv2_3876_21_27 | 34232 | 34360 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3876_21 | HRGMv2_3876_21_28 | 34529 | 35509 | + | GH43_3 |
| CAZyme | HRGMv2_3876_21 | HRGMv2_3876_21_29 | 35584 | 37416 | + | GH36 |
| CAZyme | HRGMv2_3876_21 | HRGMv2_3876_21_30 | 37560 | 39824 | + | GH3 |
| TC | HRGMv2_3876_21 | HRGMv2_3876_21_31 | 39988 | 41649 | + | 2.A.81.1.2 |
Gene ID: HRGMv2_3876_21_21
Type: CAZyme
Location: 24360 - 25391 (+)
Type: CAZyme
Location: 24360 - 25391 (+)
Gene ID: HRGMv2_3876_21_22
Type: CAZyme
Location: 25520 - 27280 (+)
Type: CAZyme
Location: 25520 - 27280 (+)
Gene ID: HRGMv2_3876_21_23
Type: STP
Location: 27297 - 27674 (+)
Type: STP
Location: 27297 - 27674 (+)
Gene ID: HRGMv2_3876_21_24
Type: STP
Location: 27875 - 28888 (+)
Type: STP
Location: 27875 - 28888 (+)
Gene ID: HRGMv2_3876_21_25
Type: TC
Location: 28950 - 32468 (+)
Type: TC
Location: 28950 - 32468 (+)
Gene ID: HRGMv2_3876_21_26
Type: pfam
Location: 32496 - 34295 (+)
Type: pfam
Location: 32496 - 34295 (+)
Gene ID: HRGMv2_3876_21_27
Type:
Location: 34232 - 34360 (-)
Type:
Location: 34232 - 34360 (-)
Gene ID: HRGMv2_3876_21_28
Type: CAZyme
Location: 34529 - 35509 (+)
Type: CAZyme
Location: 34529 - 35509 (+)
Gene ID: HRGMv2_3876_21_29
Type: CAZyme
Location: 35584 - 37416 (+)
Type: CAZyme
Location: 35584 - 37416 (+)
Gene ID: HRGMv2_3876_21_30
Type: CAZyme
Location: 37560 - 39824 (+)
Type: CAZyme
Location: 37560 - 39824 (+)
Gene ID: HRGMv2_3876_21_31
Type: TC
Location: 39988 - 41649 (+)
Type: TC
Location: 39988 - 41649 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
UBA7173
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.