Cluster: HRGMv2_3876_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_3876
- CGC Family ID: CGCFAM_04337
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3876_11 | HRGMv2_3876_11_17 | 27538 | 30723 | + | 1.B.14.6.1 |
| pfam | HRGMv2_3876_11 | HRGMv2_3876_11_18 | 30770 | 32665 | + | SusD_RagB | SusD-like_3 |
| CAZyme | HRGMv2_3876_11 | HRGMv2_3876_11_19 | 32709 | 33617 | + | CBM9 |
| CAZyme | HRGMv2_3876_11 | HRGMv2_3876_11_20 | 33718 | 35655 | + | CBM51 | GH27 |
| peptidase | HRGMv2_3876_11 | HRGMv2_3876_11_21 | 35692 | 36501 | + | S09.UPW |
| CAZyme | HRGMv2_3876_11 | HRGMv2_3876_11_22 | 36509 | 39691 | + | GH2 |
Gene ID: HRGMv2_3876_11_17
Type: TC
Location: 27538 - 30723 (+)
Type: TC
Location: 27538 - 30723 (+)
Gene ID: HRGMv2_3876_11_18
Type: pfam
Location: 30770 - 32665 (+)
Type: pfam
Location: 30770 - 32665 (+)
Gene ID: HRGMv2_3876_11_19
Type: CAZyme
Location: 32709 - 33617 (+)
Type: CAZyme
Location: 32709 - 33617 (+)
Gene ID: HRGMv2_3876_11_20
Type: CAZyme
Location: 33718 - 35655 (+)
Type: CAZyme
Location: 33718 - 35655 (+)
Gene ID: HRGMv2_3876_11_21
Type: peptidase
Location: 35692 - 36501 (+)
Type: peptidase
Location: 35692 - 36501 (+)
Gene ID: HRGMv2_3876_11_22
Type: CAZyme
Location: 36509 - 39691 (+)
Type: CAZyme
Location: 36509 - 39691 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
UBA7173
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.