Cluster: HRGMv2_3873_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3873
- CGC Family ID: CGCFAM_00878
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3873_26 | HRGMv2_3873_26_7 | 9237 | 11225 | + | 1.B.6.1.14 |
| pfam | HRGMv2_3873_26 | HRGMv2_3873_26_8 | 11666 | 13057 | + | N-glycanase_C |
| CAZyme | HRGMv2_3873_26 | HRGMv2_3873_26_9 | 13180 | 14445 | - | GT30 |
| pfam | HRGMv2_3873_26 | HRGMv2_3873_26_10 | 14442 | 15971 | - | tRNA-synt_1c | Anticodon_2 |
| pfam | HRGMv2_3873_26 | HRGMv2_3873_26_11 | 16014 | 16670 | - | DUF3256 |
| TC | HRGMv2_3873_26 | HRGMv2_3873_26_12 | 16667 | 18604 | - | 3.A.18.1.1 |
Gene ID: HRGMv2_3873_26_7
Type: TC
Location: 9237 - 11225 (+)
Type: TC
Location: 9237 - 11225 (+)
Gene ID: HRGMv2_3873_26_8
Type: pfam
Location: 11666 - 13057 (+)
Type: pfam
Location: 11666 - 13057 (+)
Gene ID: HRGMv2_3873_26_9
Type: CAZyme
Location: 13180 - 14445 (-)
Type: CAZyme
Location: 13180 - 14445 (-)
Gene ID: HRGMv2_3873_26_10
Type: pfam
Location: 14442 - 15971 (-)
Type: pfam
Location: 14442 - 15971 (-)
Gene ID: HRGMv2_3873_26_11
Type: pfam
Location: 16014 - 16670 (-)
Type: pfam
Location: 16014 - 16670 (-)
Gene ID: HRGMv2_3873_26_12
Type: TC
Location: 16667 - 18604 (-)
Type: TC
Location: 16667 - 18604 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Species
Lepagella sp002493515
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.