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Cluster: HRGMv2_3873_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3873_43 HRGMv2_3873_43_11 10913 13357 + 8.A.3.3.3
pfam HRGMv2_3873_43 HRGMv2_3873_43_12 13354 14508 + EpsG
pfam HRGMv2_3873_43 HRGMv2_3873_43_13 14511 15410 + GNT-I
CAZyme HRGMv2_3873_43 HRGMv2_3873_43_14 15491 16558 + GT4
CAZyme HRGMv2_3873_43 HRGMv2_3873_43_15 16566 17372 + GT26
pfam HRGMv2_3873_43 HRGMv2_3873_43_16 17369 18478 + Glyco_tran_WbsX
TC HRGMv2_3873_43 HRGMv2_3873_43_17 18503 19939 + 2.A.66.2.6
Gene ID: HRGMv2_3873_43_11
Type: TC
Location: 10913 - 13357 (+)
Gene ID: HRGMv2_3873_43_12
Type: pfam
Location: 13354 - 14508 (+)
Gene ID: HRGMv2_3873_43_13
Type: pfam
Location: 14511 - 15410 (+)
Gene ID: HRGMv2_3873_43_14
Type: CAZyme
Location: 15491 - 16558 (+)
Gene ID: HRGMv2_3873_43_15
Type: CAZyme
Location: 16566 - 17372 (+)
Gene ID: HRGMv2_3873_43_16
Type: pfam
Location: 17369 - 18478 (+)
Gene ID: HRGMv2_3873_43_17
Type: TC
Location: 18503 - 19939 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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