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Cluster: HRGMv2_3873_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3873_38 HRGMv2_3873_38_4 2933 4957 + 2.A.37.2.5
NULL(UNKNOWN) HRGMv2_3873_38 HRGMv2_3873_38_5 5067 5684 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3873_38 HRGMv2_3873_38_6 5678 6865 - GlcNAc_2-epim
TC HRGMv2_3873_38 HRGMv2_3873_38_7 6905 8359 - 2.A.2.3.5
CAZyme HRGMv2_3873_38 HRGMv2_3873_38_8 8380 9558 - GH130_1
CAZyme HRGMv2_3873_38 HRGMv2_3873_38_9 9583 10689 - GH26
NULL(UNKNOWN) HRGMv2_3873_38 HRGMv2_3873_38_10 10762 10878 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3873_38 HRGMv2_3873_38_11 11252 13456 + GH36
Gene ID: HRGMv2_3873_38_4
Type: TC
Location: 2933 - 4957 (+)
Gene ID: HRGMv2_3873_38_5
Type:
Location: 5067 - 5684 (+)
Gene ID: HRGMv2_3873_38_6
Type: pfam
Location: 5678 - 6865 (-)
Gene ID: HRGMv2_3873_38_7
Type: TC
Location: 6905 - 8359 (-)
Gene ID: HRGMv2_3873_38_8
Type: CAZyme
Location: 8380 - 9558 (-)
Gene ID: HRGMv2_3873_38_9
Type: CAZyme
Location: 9583 - 10689 (-)
Gene ID: HRGMv2_3873_38_10
Type:
Location: 10762 - 10878 (-)
Gene ID: HRGMv2_3873_38_11
Type: CAZyme
Location: 11252 - 13456 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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