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Cluster: HRGMv2_3869_CGC51

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3869_55 HRGMv2_3869_55_7 9394 11760 + 9.A.8.1.6
NULL(UNKNOWN) HRGMv2_3869_55 HRGMv2_3869_55_8 11781 11975 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_3869_55 HRGMv2_3869_55_9 12030 12776 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3869_55 HRGMv2_3869_55_10 12880 14238 - GH23
pfam HRGMv2_3869_55 HRGMv2_3869_55_11 14347 16317 - Porin_10
pfam HRGMv2_3869_55 HRGMv2_3869_55_12 16411 18123 + tRNA-synt_1c | tRNA-synt_1c_C | tRNA-synt_1c_C2
TC HRGMv2_3869_55 HRGMv2_3869_55_13 18136 19008 + 2.A.115.1.1
Gene ID: HRGMv2_3869_55_7
Type: TC
Location: 9394 - 11760 (+)
Gene ID: HRGMv2_3869_55_8
Type:
Location: 11781 - 11975 (+)
Gene ID: HRGMv2_3869_55_9
Type:
Location: 12030 - 12776 (-)
Gene ID: HRGMv2_3869_55_10
Type: CAZyme
Location: 12880 - 14238 (-)
Gene ID: HRGMv2_3869_55_11
Type: pfam
Location: 14347 - 16317 (-)
Gene ID: HRGMv2_3869_55_12
Type: pfam
Location: 16411 - 18123 (+)
Gene ID: HRGMv2_3869_55_13
Type: TC
Location: 18136 - 19008 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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