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Cluster: HRGMv2_3869_CGC47

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3869_34 HRGMv2_3869_34_19 26463 27695 + GT30
pfam HRGMv2_3869_34 HRGMv2_3869_34_20 27716 28780 - IF-2B
peptidase HRGMv2_3869_34 HRGMv2_3869_34_21 28800 30134 - S37.UNW
TC HRGMv2_3869_34 HRGMv2_3869_34_22 30381 31748 + 2.A.66.1.10
pfam HRGMv2_3869_34 HRGMv2_3869_34_23 31745 32347 - Hydrolase | HAD_2
TC HRGMv2_3869_34 HRGMv2_3869_34_24 32483 34918 - 1.B.14.6.5
CAZyme HRGMv2_3869_34 HRGMv2_3869_34_25 34934 37255 - GH20
Gene ID: HRGMv2_3869_34_19
Type: CAZyme
Location: 26463 - 27695 (+)
Gene ID: HRGMv2_3869_34_20
Type: pfam
Location: 27716 - 28780 (-)
Gene ID: HRGMv2_3869_34_21
Type: peptidase
Location: 28800 - 30134 (-)
Gene ID: HRGMv2_3869_34_22
Type: TC
Location: 30381 - 31748 (+)
Gene ID: HRGMv2_3869_34_23
Type: pfam
Location: 31745 - 32347 (-)
Gene ID: HRGMv2_3869_34_24
Type: TC
Location: 32483 - 34918 (-)
Gene ID: HRGMv2_3869_34_25
Type: CAZyme
Location: 34934 - 37255 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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