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Cluster: HRGMv2_3869_CGC39

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3869_25 HRGMv2_3869_25_39 46089 47756 + 2.A.81.1.2
peptidase HRGMv2_3869_25 HRGMv2_3869_25_40 47766 48563 + C40.009
pfam HRGMv2_3869_25 HRGMv2_3869_25_41 48651 49259 - WbqC
CAZyme HRGMv2_3869_25 HRGMv2_3869_25_42 49835 51820 + GH13_8
CAZyme HRGMv2_3869_25 HRGMv2_3869_25_43 51907 53862 + GH133
CAZyme HRGMv2_3869_25 HRGMv2_3869_25_44 53934 55208 + GT5
CAZyme HRGMv2_3869_25 HRGMv2_3869_25_45 55298 56635 + GH57
CAZyme HRGMv2_3869_25 HRGMv2_3869_25_46 56791 61041 + GT3 | GT35
Gene ID: HRGMv2_3869_25_39
Type: TC
Location: 46089 - 47756 (+)
Gene ID: HRGMv2_3869_25_40
Type: peptidase
Location: 47766 - 48563 (+)
Gene ID: HRGMv2_3869_25_41
Type: pfam
Location: 48651 - 49259 (-)
Gene ID: HRGMv2_3869_25_42
Type: CAZyme
Location: 49835 - 51820 (+)
Gene ID: HRGMv2_3869_25_43
Type: CAZyme
Location: 51907 - 53862 (+)
Gene ID: HRGMv2_3869_25_44
Type: CAZyme
Location: 53934 - 55208 (+)
Gene ID: HRGMv2_3869_25_45
Type: CAZyme
Location: 55298 - 56635 (+)
Gene ID: HRGMv2_3869_25_46
Type: CAZyme
Location: 56791 - 61041 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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