dbCAN Logo

Cluster: HRGMv2_3869_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3869_24 HRGMv2_3869_24_26 35035 35979 - 2.A.19.5.2
pfam HRGMv2_3869_24 HRGMv2_3869_24_27 36054 36983 - DUF3137
pfam HRGMv2_3869_24 HRGMv2_3869_24_28 37064 37615 - LemA
TC HRGMv2_3869_24 HRGMv2_3869_24_29 37700 38308 + 2.A.76.1.7
TC HRGMv2_3869_24 HRGMv2_3869_24_30 38374 38739 + 9.B.55.2.1
CAZyme HRGMv2_3869_24 HRGMv2_3869_24_31 38752 40881 - GH89
TC HRGMv2_3869_24 HRGMv2_3869_24_32 40972 42654 - 2.A.53.3.9
peptidase HRGMv2_3869_24 HRGMv2_3869_24_33 42850 44268 + C44.UNW
CAZyme HRGMv2_3869_24 HRGMv2_3869_24_34 44427 47513 + GH2
Gene ID: HRGMv2_3869_24_26
Type: TC
Location: 35035 - 35979 (-)
Gene ID: HRGMv2_3869_24_27
Type: pfam
Location: 36054 - 36983 (-)
Gene ID: HRGMv2_3869_24_28
Type: pfam
Location: 37064 - 37615 (-)
Gene ID: HRGMv2_3869_24_29
Type: TC
Location: 37700 - 38308 (+)
Gene ID: HRGMv2_3869_24_30
Type: TC
Location: 38374 - 38739 (+)
Gene ID: HRGMv2_3869_24_31
Type: CAZyme
Location: 38752 - 40881 (-)
Gene ID: HRGMv2_3869_24_32
Type: TC
Location: 40972 - 42654 (-)
Gene ID: HRGMv2_3869_24_33
Type: peptidase
Location: 42850 - 44268 (+)
Gene ID: HRGMv2_3869_24_34
Type: CAZyme
Location: 44427 - 47513 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List