Cluster: HRGMv2_3869_CGC33
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: HRGMv2_3869
- CGC Family ID: CGCFAM_00111
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3869_22 | HRGMv2_3869_22_25 | 20002 | 23436 | - | 1.B.14.6.1 |
| STP | HRGMv2_3869_22 | HRGMv2_3869_22_26 | 23532 | 24689 | - | FecR |
| TF | HRGMv2_3869_22 | HRGMv2_3869_22_27 | 24791 | 25324 | - | GerE |
| CAZyme | HRGMv2_3869_22 | HRGMv2_3869_22_28 | 25907 | 29929 | + | CBM32 | GH2 |
| CAZyme | HRGMv2_3869_22 | HRGMv2_3869_22_29 | 30066 | 31595 | + | GH175 |
| TC | HRGMv2_3869_22 | HRGMv2_3869_22_30 | 31826 | 34348 | + | 2.A.21.9.2 |
Gene ID: HRGMv2_3869_22_25
Type: TC
Location: 20002 - 23436 (-)
Type: TC
Location: 20002 - 23436 (-)
Gene ID: HRGMv2_3869_22_26
Type: STP
Location: 23532 - 24689 (-)
Type: STP
Location: 23532 - 24689 (-)
Gene ID: HRGMv2_3869_22_27
Type: TF
Location: 24791 - 25324 (-)
Type: TF
Location: 24791 - 25324 (-)
Gene ID: HRGMv2_3869_22_28
Type: CAZyme
Location: 25907 - 29929 (+)
Type: CAZyme
Location: 25907 - 29929 (+)
Gene ID: HRGMv2_3869_22_29
Type: CAZyme
Location: 30066 - 31595 (+)
Type: CAZyme
Location: 30066 - 31595 (+)
Gene ID: HRGMv2_3869_22_30
Type: TC
Location: 31826 - 34348 (+)
Type: TC
Location: 31826 - 34348 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Marinifilaceae
Genus
Odoribacter
Species
Odoribacter sp905204385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.