dbCAN Logo

Cluster: HRGMv2_3869_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3869_19 HRGMv2_3869_19_2 1352 2854 - 1.B.42.1.13
pfam HRGMv2_3869_19 HRGMv2_3869_19_3 2950 3327 - START_2
TC HRGMv2_3869_19 HRGMv2_3869_19_4 3440 4729 - 9.B.126.2.1
STP HRGMv2_3869_19 HRGMv2_3869_19_5 4919 6211 - PALP
CAZyme HRGMv2_3869_19 HRGMv2_3869_19_6 6301 7035 - GT2
STP HRGMv2_3869_19 HRGMv2_3869_19_7 7089 10103 - TPR_1 | TPR_1
NULL(UNKNOWN) HRGMv2_3869_19 HRGMv2_3869_19_8 10304 10474 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3869_19 HRGMv2_3869_19_9 10548 12470 + 1.A.33.1.2
STP HRGMv2_3869_19 HRGMv2_3869_19_10 12838 14793 - HisKA
STP HRGMv2_3869_19 HRGMv2_3869_19_11 14807 16672 - HATPase_c | HisKA
TC HRGMv2_3869_19 HRGMv2_3869_19_12 16949 18748 - 1.I.1.1.3
Gene ID: HRGMv2_3869_19_2
Type: TC
Location: 1352 - 2854 (-)
Gene ID: HRGMv2_3869_19_3
Type: pfam
Location: 2950 - 3327 (-)
Gene ID: HRGMv2_3869_19_4
Type: TC
Location: 3440 - 4729 (-)
Gene ID: HRGMv2_3869_19_5
Type: STP
Location: 4919 - 6211 (-)
Gene ID: HRGMv2_3869_19_6
Type: CAZyme
Location: 6301 - 7035 (-)
Gene ID: HRGMv2_3869_19_7
Type: STP
Location: 7089 - 10103 (-)
Gene ID: HRGMv2_3869_19_8
Type:
Location: 10304 - 10474 (+)
Gene ID: HRGMv2_3869_19_9
Type: TC
Location: 10548 - 12470 (+)
Gene ID: HRGMv2_3869_19_10
Type: STP
Location: 12838 - 14793 (-)
Gene ID: HRGMv2_3869_19_11
Type: STP
Location: 14807 - 16672 (-)
Gene ID: HRGMv2_3869_19_12
Type: TC
Location: 16949 - 18748 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List