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Cluster: HRGMv2_3869_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3869_16 HRGMv2_3869_16_43 59397 61709 + GH31_16
CAZyme HRGMv2_3869_16 HRGMv2_3869_16_44 61880 64459 + CBM51 | GH36
TC HRGMv2_3869_16 HRGMv2_3869_16_45 64487 65935 - 2.A.21.9.1
pfam HRGMv2_3869_16 HRGMv2_3869_16_46 66078 67202 - KdpD
NULL(UNKNOWN) HRGMv2_3869_16 HRGMv2_3869_16_47 67254 67952 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3869_16 HRGMv2_3869_16_48 68018 68602 - 3.A.3.7.2
TC HRGMv2_3869_16 HRGMv2_3869_16_49 68629 70554 - 3.A.3.7.2
TC HRGMv2_3869_16 HRGMv2_3869_16_50 70745 72451 - 3.A.3.7.2
Gene ID: HRGMv2_3869_16_43
Type: CAZyme
Location: 59397 - 61709 (+)
Gene ID: HRGMv2_3869_16_44
Type: CAZyme
Location: 61880 - 64459 (+)
Gene ID: HRGMv2_3869_16_45
Type: TC
Location: 64487 - 65935 (-)
Gene ID: HRGMv2_3869_16_46
Type: pfam
Location: 66078 - 67202 (-)
Gene ID: HRGMv2_3869_16_47
Type:
Location: 67254 - 67952 (-)
Gene ID: HRGMv2_3869_16_48
Type: TC
Location: 68018 - 68602 (-)
Gene ID: HRGMv2_3869_16_49
Type: TC
Location: 68629 - 70554 (-)
Gene ID: HRGMv2_3869_16_50
Type: TC
Location: 70745 - 72451 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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